2021
|
| 1. | A minimal model for synaptic integration in simple neurons Journal Article Harjinder Singh Adrian Alva, Harjinder Singh Physica D: Nonlinear Phenomena, 426 , 132988 (2021) Links | BibTeX | Tags: publication @article{Singh2021,
title = {A minimal model for synaptic integration in simple neurons},
author = {Harjinder Singh },
url = {https://www.sciencedirect.com/science/article/pii/S0167278921001457},
year = {2021},
date = {2021-11-15},
journal = {Physica D: Nonlinear Phenomena},
volume = {426},
pages = {132988},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 2. | Improving third-generation leptoquark searches with combined signals and boosted top quarks Journal Article Subhadip Mitra Arvind Bhaskar, Tanumoy Mandal, Subhadip Mitra, Mohit Sharma Physical Review D, 104 (7), 075037 (2021) Links | BibTeX | Tags: publication @article{S21b,
title = {Improving third-generation leptoquark searches with combined signals and boosted top quarks},
author = {Subhadip Mitra },
url = {https://link.aps.org/doi/10.1103/PhysRevD.104.075037},
doi = {10.1103/physrevd.104.075037},
year = {2021},
date = {2021-10-27},
journal = {Physical Review D},
volume = {104},
number = {7},
pages = {075037},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 3. | Machine Learning Approaches in Detection and Diagnosis of Covid-19 Journal Article Nita Parekh Suba S and Nita Parekh (2021) BibTeX | Tags: publication @article{11p,
title = {Machine Learning Approaches in Detection and Diagnosis of Covid-19},
author = {Nita Parekh},
year = {2021},
date = {2021-09-09},
booktitle = {Artificial Intelligence and Machine Learning in Healthcare Perspective},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 4. | Correlated Response of Protein Side-Chain Fluctuations and Conformational Entropy to Ligand Binding Journal Article Marimuthu Krishnan Rajitha T Rajeshwar, Moumita Saharay, Jeremy C Smith, Marimuthu Krishnan The Journal of Physical Chemistry B, 125 (34), 9641–9651 (2021), ISSN: 1520-6106 Links | BibTeX | Tags: publication @article{K21,
title = {Correlated Response of Protein Side-Chain Fluctuations and Conformational Entropy to Ligand Binding},
author = {Marimuthu Krishnan },
url = {https://doi.org/10.1021/acs.jpcb.1c01227 },
doi = {10.1021/acs.jpcb.1c01227 },
issn = {1520-6106},
year = {2021},
date = {2021-08-23},
journal = {The Journal of Physical Chemistry B},
volume = {125},
number = {34},
pages = {9641–9651},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 5. | BiRDS - Binding Residue Detection from Protein Sequences using Deep ResNets Journal Article U. Deva Priyakumar Chelur Vineeth, Priyakumar UD ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{62d,
title = {BiRDS - Binding Residue Detection from Protein Sequences using Deep ResNets},
author = {U. Deva Priyakumar},
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60eed1c90387b16d29cc5661},
doi = {10.33774},
year = {2021},
date = {2021-07-15},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 6. | Improving third-generation leptoquark searches with combined signals and boosted top Journal Article Subhadip Mitra Arvind Bhaskar, Tanumoy Mandal, Subhadip Mitra ,Mohit Sharma arXiv, (2021) Links | BibTeX | Tags: publication @article{S21,
title = {Improving third-generation leptoquark searches with combined signals and boosted top},
author = {Subhadip Mitra },
url = {https://arxiv.org/abs/2106.07605},
year = {2021},
date = {2021-06-14},
journal = {arXiv},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 7. | SCONES: Self-Consistent Neural Network for Protein Stability Prediction Upon Mutation Journal Article U. Deva Priyakumar Yashas Samaga B L ,Shampa Raghunathan ,U. Deva Priyakumar ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{61d,
title = {SCONES: Self-Consistent Neural Network for Protein Stability Prediction Upon Mutation},
author = {U. Deva Priyakumar},
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60c759be4c8919ff44ad4e32},
doi = {10.26434/chemrxiv.14729445.v1},
year = {2021},
date = {2021-06-04},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 8. | DART: Deep Learning Enabled Topological Interaction Model for Energy Prediction of Metal Clusters and its Application in Identifying Unique Low Energy Isomers Journal Article U. Deva Priyakumar Rohit Modee ,Sheena Agarwal ,Ashwini Verma ,Kavita Joshi ,U. Deva Priyakumar ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{60d,
title = {DART: Deep Learning Enabled Topological Interaction Model for Energy Prediction of Metal Clusters and its Application in Identifying Unique Low Energy Isomers},
author = {U. Deva Priyakumar },
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60c7593b702a9b595a18ce7b},
doi = {10.26434/chemrxiv.14672682.v1},
year = {2021},
date = {2021-05-26},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 9. | MMBERT: Multimodal BERT Pretraining for Improved Medical VQA Journal Article U. Deva Priyakumar Yash Khare, Viraj Bagal, Minesh Mathew, Adithi Devi, U Deva Priyakumar, CV Jawahar
IEEE 18th International Symposium on Biomedical Imaging (ISBI), 1033-1036 (2021) Links | BibTeX | Tags: publication @article{58d,
title = {MMBERT: Multimodal BERT Pretraining for Improved Medical VQA},
author = {U. Deva Priyakumar},
url = {https://ieeexplore.ieee.org/abstract/document/9434063},
doi = {10.1109/ISBI48211.2021.9434063},
year = {2021},
date = {2021-05-25},
journal = {IEEE 18th International Symposium on Biomedical Imaging (ISBI)},
pages = {1033-1036},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 10. | Exploring Genetic-histologic Relationships in Breast Cancer Journal Article Vinod PK Ruchi Chauhan; PK Vinod; CV Jawahar IEEE 18th International Symposium on Biomedical Imaging (ISBI), 1187-1190 (2021) Links | BibTeX | Tags: publication @article{v21,
title = {Exploring Genetic-histologic Relationships in Breast Cancer},
author = {Vinod PK },
url = {https://ieeexplore.ieee.org/abstract/document/9434130},
doi = {10.1109/ISBI48211.2021.9434130},
year = {2021},
date = {2021-05-25},
journal = {IEEE 18th International Symposium on Biomedical Imaging (ISBI)},
pages = {1187-1190},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 11. | Multiscale Modeling of Wobble to Watson–Crick-Like Guanine–Uracil Tautomerization Pathways in RNA Journal Article U. Deva Priyakumar Shreya Chandorkar, Shampa Raghunathan ,Tanashree Jaganade and U. Deva Priyakumar International Journal of Molecular Sciences, 22 (11), 5411 (2021) Links | BibTeX | Tags: publication @article{56db,
title = {Multiscale Modeling of Wobble to Watson–Crick-Like Guanine–Uracil Tautomerization Pathways in RNA},
author = {U. Deva Priyakumar},
url = {https://www.mdpi.com/1422-0067/22/11/5411},
doi = {10.3390/ijms22115411},
year = {2021},
date = {2021-05-21},
journal = {International Journal of Molecular Sciences},
volume = {22},
number = {11},
pages = {5411},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 12. | DeepPocket: Ligand Binding Site Detection and Segmentation using 3D Convolutional Neural Networks Journal Article U. Deva Priyakumar Rishal Aggarwal ,Akash Gupta ,Vineeth Chelur ,C. V. Jawahar ,U. Deva Priyakumar ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{59db,
title = {DeepPocket: Ligand Binding Site Detection and Segmentation using 3D Convolutional Neural Networks},
author = {U. Deva Priyakumar },
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60f00407b95bdd58a2626c33},
doi = {10.33774/chemrxiv-2021-7fkkx-v2},
year = {2021},
date = {2021-05-21},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 13. | LHC Bounds on RD(∗) motivated Leptoquark Models Journal Article Subhadip Mitra Arvind Bhaskar, Tanumoy Mandal, Subhadip Mitra, Cyrin Neeraj, Swapnil Raz arXiv, (2021) Links | BibTeX | Tags: publication @article{sm21,
title = {LHC Bounds on RD(∗) motivated Leptoquark Models},
author = {Subhadip Mitra },
url = {https://arxiv.org/abs/2105.07210},
year = {2021},
date = {2021-05-15},
journal = {arXiv},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 14. | Machine learning based clinical decision support system for early COVID-19 mortality prediction Journal Article U. Deva Priyakumar Akshaya Karthikeyan, Akshit Garg, PK Vinod, U Deva Priyakumar Frontiers in Public Health, 2021 (9), 626697 (2021) Links | BibTeX | Tags: publication @article{55,
title = {Machine learning based clinical decision support system for early COVID-19 mortality prediction},
author = {U. Deva Priyakumar},
url = {https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149622/},
year = {2021},
date = {2021-05-12},
journal = {Frontiers in Public Health},
volume = {2021},
number = {9},
pages = {626697},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 15. | LigGPT: Molecular Generation using a Transformer-Decoder Model Journal Article U. Deva Priyakumar Viraj Bagal ,Rishal Aggarwal ,P. K. Vinod ,U. Deva Priyakumar ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{65d,
title = {LigGPT: Molecular Generation using a Transformer-Decoder Model},
author = {U. Deva Priyakumar},
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60c7588e469df48597f456ae},
doi = {10.26434},
year = {2021},
date = {2021-05-11},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 16. | Cancellation in dark matter-nucleon interactions: The role of non-standard-model-like Yukawa couplings Journal Article Subhadip Mitra Debottam Das, Bibhabasu De, Subhadip Mitra Physics Letters B, 815 , 136159 (2021), ISSN: 0370-2693, Abstract | Links | BibTeX | Tags: publication @article{m21,
title = {Cancellation in dark matter-nucleon interactions: The role of non-standard-model-like Yukawa couplings},
author = {Subhadip Mitra },
url = {https://www.sciencedirect.com/science/article/pii/S037026932100099X?via%3Dihub},
issn = {0370-2693,},
year = {2021},
date = {2021-04-10},
journal = {Physics Letters B},
volume = {815},
pages = {136159},
abstract = {Extensive searches to probe the particle nature of dark matter (DM) have been going on for some decades now but, so far, no conclusive evidence has been found. Among various options, the Weakly Interacting Massive Particles (WIMP) remains one of the prime possibilities as candidates for DM near the TeV scale. Taking a phenomenological view, such null results may be explained for a generic WIMP in a Higgs-portal scenario if we allow the light-quark Yukawa couplings to assume non-Standard Model (non-SM)-like values. This follows from a cancellation among different terms in the DM-nucleon scattering which can, in turn, lead to a vanishingly small direct-detection cross section. It might also lead to isospin violation in the DM-nucleon scattering. Such non-SM values of light-quark Yukawa couplings may be probed in the high luminosity run of the LHC.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
Extensive searches to probe the particle nature of dark matter (DM) have been going on for some decades now but, so far, no conclusive evidence has been found. Among various options, the Weakly Interacting Massive Particles (WIMP) remains one of the prime possibilities as candidates for DM near the TeV scale. Taking a phenomenological view, such null results may be explained for a generic WIMP in a Higgs-portal scenario if we allow the light-quark Yukawa couplings to assume non-Standard Model (non-SM)-like values. This follows from a cancellation among different terms in the DM-nucleon scattering which can, in turn, lead to a vanishingly small direct-detection cross section. It might also lead to isospin violation in the DM-nucleon scattering. Such non-SM values of light-quark Yukawa couplings may be probed in the high luminosity run of the LHC. |
| 17. | MEMES: Machine learning framework for Enhanced MolEcular Screening Journal Article U. Deva Priyakumar Sarvesh Mehta ,Siddhartha Laghuvarapu ,Yashaswi Pathak ,Aaftaab Sethi ,Mallika Alvala ,U. Deva Priyakumar ChemRxiv., (2021) Links | BibTeX | Tags: publication @article{64d,
title = {MEMES: Machine learning framework for Enhanced MolEcular Screening},
author = {U. Deva Priyakumar },
url = {https://chemrxiv.org/engage/chemrxiv/article-details/60eed221609d0d5e8fdaa646},
doi = {10.33774},
year = {2021},
date = {2021-03-03},
journal = {ChemRxiv.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 18. | DbStRiPs: Database of structural repeats in proteins Journal Article Nita Parekh Broto Chakrabarty, Nita Parekh
Protein Science, 1-14 (2021) Links | BibTeX | Tags: publication @article{p21,
title = {DbStRiPs: Database of structural repeats in proteins},
author = {Nita Parekh },
url = { https://doi.org/10.1002/pro.4052},
year = {2021},
date = {2021-02-27},
journal = {Protein Science},
pages = {1-14},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 19. | Precise limits on the charge-2/3 U1 vector leptoquark Journal Article Subhadip Mitra Arvind Bhaskar, Diganta Das, Tanumoy Mandal, Subhadip Mitra, Cyrin Neeraj arXiv, (2021) Links | BibTeX | Tags: publication @article{sm22,
title = {Precise limits on the charge-2/3 U1 vector leptoquark},
author = {Subhadip Mitra },
url = {https://arxiv.org/abs/2101.12069},
year = {2021},
date = {2021-02-18},
journal = {arXiv},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 20. | Learning Atomic Interactions through Solvation Free Energy Prediction Using Graph Neural Networks Journal Article U. Deva Priyakumar Yashaswi Pathak, Sarvesh Mehta, and U. Deva Priyakumar Journal of Chemical Information and Modeling, 61 (2), 689-698 (2021) Links | BibTeX | Tags: publication @article{66db,
title = {Learning Atomic Interactions through Solvation Free Energy Prediction Using Graph Neural Networks},
author = {U. Deva Priyakumar },
url = {https://pubs.acs.org/doi/10.1021/acs.jcim.0c01413?ref=pdf},
doi = {10.1021/acs.jcim.0c01413},
year = {2021},
date = {2021-02-05},
journal = {Journal of Chemical Information and Modeling},
volume = {61},
number = {2},
pages = {689-698},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 21. | Applications of Machine Learning Algorithms to Cancer Data Book Nita Parekh Suba S and Nita Parekh (2021) BibTeX | Tags: publication @book{11q,
title = {Applications of Machine Learning Algorithms to Cancer Data},
author = {Nita Parekh},
year = {2021},
date = {2021-01-06},
booktitle = {Big Data and Artificial Intelligence for Healthcare Applications},
keywords = {publication},
pubstate = {published},
tppubtype = {book}
}
|
2020
|
| 22. | Allosteric Response of DNA Recognition Helices of Catabolite Activator Protein to cAMP and DNA Binding Journal Article Marimuthu Krishnan Akshay Prabhakant, Abhinandan Panigrahi, Marimuthu Krishnan Journal of Chemical Information and Modeling, 60 (12), 6366-6376 (2020) Links | BibTeX | Tags: publication @article{2f,
title = {Allosteric Response of DNA Recognition Helices of Catabolite Activator Protein to cAMP and DNA Binding},
author = {Marimuthu Krishnan},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jcim.0c00617},
year = {2020},
date = {2020-10-27},
journal = {Journal of Chemical Information and Modeling},
volume = {60 },
number = {12},
pages = {6366-6376},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 23. | Enhancing scalar productions with leptoquarks at the Large Hadron Collider(LHC) at CERN Journal Article Subhadip Mitra Arvind Bhaskar, Debottam Das, Bibhabasu De, Subhadip Mitra Physical Review D102,035002, 15 (2020) Links | BibTeX | Tags: publication @article{4b,
title = {Enhancing scalar productions with leptoquarks at the Large Hadron Collider(LHC) at CERN},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.102.035002},
year = {2020},
date = {2020-08-04},
journal = {Physical Review D102,035002},
pages = {15},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 24. | Machine learning for accurate force calculations in molecular dynamics simulations Journal Article U. Deva Priyakumar Punyaslok Pattnaik, Shampa Raghunathan, Tarun Kalluri, Prabhakar Bhimalapuram, C. V. Jawahar, and U. Deva Priyakumar J. Phys. Chem. A, 124 , 6954–6967 (2020) Links | BibTeX | Tags: publication @article{3,
title = {Machine learning for accurate force calculations in molecular dynamics simulations},
author = {U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jpca.0c03926},
year = {2020},
date = {2020-07-29},
journal = {J. Phys. Chem. A},
volume = {124},
pages = { 6954–6967},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 25. | Modeling the control of meiotic cell divisions: Entry, Progression, and Exit Journal Article Vinod PK
Prakrati Dangarh, Nishtha Pandey, Vinod PK
Biophysical Journal, 119 , 1015-1024 (2020) Links | BibTeX | Tags: publication @article{2i,
title = {Modeling the control of meiotic cell divisions: Entry, Progression, and Exit},
author = {Vinod PK
},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0006349520305671},
year = {2020},
date = {2020-07-29},
journal = {Biophysical Journal},
volume = {119},
pages = {1015-1024},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 26. | Design of a MAPK signalling cascade balances energetic cost versus accuracy of information transmission. Journal Article Bhaswar Ghosh Anders, A., Bhaswar Ghosh., Glatter, T, Sourjik V Nature Communications , 11 (1), 3494 (2020) Links | BibTeX | Tags: publication @article{11m,
title = {Design of a MAPK signalling cascade balances energetic cost versus accuracy of information transmission. },
author = {Bhaswar Ghosh},
url = {https://www.researchgate.net/publication/342897769_Design_of_a_MAPK_signalling_cascade_balances_energetic_cost_versus_accuracy_of_information_transmission},
year = {2020},
date = {2020-07-16},
journal = {Nature Communications },
volume = {11},
number = {1},
pages = {3494},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 27. | PRIGSA2: Improved version of Protein Repeat Identification by Graph Spectral Analysis Journal Article Nita Parekh Broto Chakrabarty, Nita Parekh Journal of Biosciences, 45 , 16 (2020) Links | BibTeX | Tags: publication @article{11s,
title = {PRIGSA2: Improved version of Protein Repeat Identification by Graph Spectral Analysis},
author = {Nita Parekh},
url = {https://link.springer.com/article/10.1007%2Fs12038-020-00058-x},
year = {2020},
date = {2020-07-02},
journal = {Journal of Biosciences},
volume = {45},
pages = {16},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 28. | Quantitative modeling and analysis show country-specific optimization of quarantine measures can potentially circumvent COVID19 infection spread post lockdown Journal Article Bhaswar Ghosh Uddipan Sarma,Bhaswar Ghosh MedRxiv, 20107169 (2020) Links | BibTeX | Tags: publication @article{11l,
title = { Quantitative modeling and analysis show country-specific optimization of quarantine measures can potentially circumvent COVID19 infection spread post lockdown},
author = {Bhaswar Ghosh},
url = {https://www.medrxiv.org/content/10.1101/2020.05.20.20107169v3.article-info},
year = {2020},
date = {2020-05-20},
journal = {MedRxiv},
pages = {20107169},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 29. | Deep Learning Enabled Inorganic Material Generator Journal Article U. Deva Priyakumar Yashaswi Pathak, Karandeep Singh Juneja, Girish Varma, Masahiro Ehara, U Deva Priyakumar Physical Chemistry Chemical Physics, 22 , 26935-26943 (2020) Links | BibTeX | Tags: publication @article{4,
title = {Deep Learning Enabled Inorganic Material Generator},
author = {U. Deva Priyakumar},
url = {https://pubs.rsc.org/en/content/articlelanding/2020/cp/d0cp03508d/unauth#!divAbstract},
year = {2020},
date = {2020-05-18},
journal = {Physical Chemistry Chemical Physics},
volume = {22},
pages = {26935-26943},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 30. | Urea-water solvation of protein side chain models Journal Article U. Deva Priyakumar Tanashree Jaganade, Aditya Chattopadhyay, Shampa Raghunathan, U. Deva Priyakumar Journal of Molecular Liquids, 311 , 113191 (2020) Links | BibTeX | Tags: publication @article{5,
title = {Urea-water solvation of protein side chain models},
author = {U. Deva Priyakumar},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0167732219335512},
year = {2020},
date = {2020-05-07},
journal = {Journal of Molecular Liquids},
volume = {311},
pages = {113191},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 31. | Network-based metabolic characterization of renal cell carcinoma Journal Article Vinod PK Nishtha Pandey, Vinay Lanke, PK Vinod Scientific reports, 10 , 1-13 (2020) Links | BibTeX | Tags: publication @article{2j,
title = {Network-based metabolic characterization of renal cell carcinoma},
author = {Vinod PK },
url = {https://www.nature.com/articles/s41598-020-62853-8},
year = {2020},
date = {2020-04-06},
journal = {Scientific reports},
volume = {10},
pages = {1-13},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 32. | Chemically interpretable graph interaction network for prediction of pharmacokinetic properties of drug-like molecules Journal Article U. Deva Priyakumar Yashaswi Pathak, Siddhartha Laghuvarapu, Sarvesh Mehta, U. Deva Priyakumar Proceedings of the AAAI Conference on Artificial Intelligence, 34 , 873-880 (2020) Links | BibTeX | Tags: publication @article{7,
title = {Chemically interpretable graph interaction network for prediction of pharmacokinetic properties of drug-like molecules},
author = { U. Deva Priyakumar},
url = {https://ojs.aaai.org/index.php/AAAI/article/view/5433},
year = {2020},
date = {2020-04-03},
booktitle = {Proceedings of the AAAI Conference on Artificial Intelligence},
journal = {Proceedings of the AAAI Conference on Artificial Intelligence},
volume = {34},
pages = {873-880},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 33. | Boosting vector leptoquark searches with boosted tops Journal Article Subhadip Mitra Arvind Bhaskar, Tanumoy Mandal, Subhadip Mitra Physical Review D 101, 115015, (2020) Links | BibTeX | Tags: publication @article{11b,
title = {Boosting vector leptoquark searches with boosted tops},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.101.115015},
year = {2020},
date = {2020-04-02},
journal = {Physical Review D 101, 115015},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 34. | Band nn: A deep learning framework for energy prediction and geometry optimization of organic small molecules Journal Article U. Deva Priyakumar Siddhartha Laghuvarapu, Yashaswi Pathak, U Deva Priyakumar Journal of Computational Chemistry, 41 , 790-799 (2020) Links | BibTeX | Tags: publication @article{8,
title = {Band nn: A deep learning framework for energy prediction and geometry optimization of organic small molecules},
author = {U. Deva Priyakumar},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/jcc.26128},
year = {2020},
date = {2020-03-30},
journal = {Journal of Computational Chemistry},
volume = {41},
pages = {790-799},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 35. | Sequence specificity, energetics and mechanism of mismatch recognition by DNA damage sensing protein Rad4/XPC Journal Article Marimuthu Krishnan Abhinandan Panigrahi, Hemanth Vemuri, Madhur Aggarwal, Kartheek Pitta, Marimuthu Krishnan Nucleic Acids Research, 48 (5), 2246–2257 (2020) Links | BibTeX | Tags: publication @article{2g,
title = {Sequence specificity, energetics and mechanism of mismatch recognition by DNA damage sensing protein Rad4/XPC},
author = {Marimuthu Krishnan},
url = {https://academic.oup.com/nar/article/48/5/2246/5734285},
year = {2020},
date = {2020-03-18},
journal = {Nucleic Acids Research},
volume = {48},
number = {5},
pages = { 2246–2257},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 36. | Integrative analysis of DNA methylation and gene expression in papillary renal cell carcinoma Authors Journal Article Vinod PK
Noor Pratap Singh , Vinod PK
Molecular Genetics and Genomics, 295 , 807–824 (2020) Links | BibTeX | Tags: publication @article{11c,
title = {Integrative analysis of DNA methylation and gene expression in papillary renal cell carcinoma Authors},
author = {Vinod PK
},
url = {https://link.springer.com/article/10.1007/s00438-020-01664-y},
year = {2020},
date = {2020-03-17},
journal = {Molecular Genetics and Genomics},
volume = {295},
pages = { 807–824},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 37. | Identification of co-expression gene networks controlling rice blast disease during an incompatible reaction. Journal Article Nita Parekh R. Bevitori , S. Sircar , R.N. de Mello , R.C. Togawa , M.V.C.B. Côrtes T.S. Oliveira , M.F. Grossi-de-Sá and Nita Parekh Genetics and molecular research, 19 (3), 23 (2020) Links | BibTeX | Tags: publication @article{2,
title = {Identification of co-expression gene networks controlling rice blast disease during an incompatible reaction.},
author = {Nita Parekh},
url = {https://www.researchgate.net/publication/343446448_Identification_of_co-expression_gene_networks_controlling_rice_blast_disease_during_an_incompatible_reaction},
year = {2020},
date = {2020-03-03},
journal = {Genetics and molecular research},
volume = {19},
number = {3},
pages = {23},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 38. | Network-based Machine Learning Approach for Structural Domain Identification in Proteins Journal Article Nita Parekh Anirudh Tiwari and Nita Parekh
bioRxiv, 2 , 960666 (2020) Links | BibTeX | Tags: publication @article{11r,
title = {Network-based Machine Learning Approach for Structural Domain Identification in Proteins},
author = {Nita Parekh},
url = {https://www.biorxiv.org/content/10.1101/2020.02.22.960666v1},
year = {2020},
date = {2020-02-24},
journal = {bioRxiv},
volume = {2},
pages = {960666},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 39. | Urea-aromatic interactions in biology Journal Article U. Deva Priyakumar Shampa Raghunathan, Tanashree Jaganade, U. Deva Priyakumar Biophysical Reviews, 12 , 65-84 (2020) Links | BibTeX | Tags: publication @article{9,
title = {Urea-aromatic interactions in biology},
author = {U. Deva Priyakumar},
url = {https://pubmed.ncbi.nlm.nih.gov/32067192/},
year = {2020},
date = {2020-02-17},
journal = {Biophysical Reviews},
volume = {12},
pages = {65-84},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 40. | Enantioseparation and chiral induction in Ag 29 nanoclusters with intrinsic chirality Journal Article U. Deva Priyakumar Hiroto Yoshida, Masahiro Ehara, U Deva Priyakumar, Tsuyoshi Kawai, Takuya Nakashima Chemical Science, 11 , 2394-2400 (2020) Links | BibTeX | Tags: publication @article{2d,
title = {Enantioseparation and chiral induction in Ag 29 nanoclusters with intrinsic chirality},
author = {U. Deva Priyakumar},
url = {https://pubs.rsc.org/ko/content/articlehtml/2020/sc/c9sc05299b},
year = {2020},
date = {2020-02-04},
journal = {Chemical Science},
volume = {11},
pages = {2394-2400},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 41. | Addressing the R D ( * ) anomalies with an S 1 leptoquark from SO(10) grand unification Journal Article Subhadip Mitra Ufuk Aydemir, Tanumoy Mandal, Subhadip Mitra Physical Review D, 101 , 015011 (2020) Links | BibTeX | Tags: publication @article{12,
title = {Addressing the R D ( * ) anomalies with an S 1 leptoquark from SO(10) grand unification},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.101.015011},
year = {2020},
date = {2020-01-22},
journal = {Physical Review D},
volume = {101},
pages = {015011},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 42. | An APT charge based descriptor for atomic level description of chemical Raman enhancement by adsorption of 4-Mercaptopyridine on semiconducting nanoclusters: A theoretical study Journal Article Harjinder Singh N. V. Suresh Kumar,Harjinder Singh Vibrational spectroscopy, 107 , 103019 (2020) Links | BibTeX | Tags: Publications @article{1,
title = {An APT charge based descriptor for atomic level description of chemical Raman enhancement by adsorption of 4-Mercaptopyridine on semiconducting nanoclusters: A theoretical study},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/426},
year = {2020},
date = {2020-01-05},
journal = {Vibrational spectroscopy},
volume = {107},
pages = {103019},
keywords = {Publications},
pubstate = {published},
tppubtype = {article}
}
|
| 43. | The HIV-1 Vpu transmembrane domain topology and formation of a hydrophobic interface with BST-2 are critical for Vpu-mediated BST-2 downregulation Journal Article U. Deva Priyakumar Nabab Khan, Siladitya Padhi, Paresh Patel, U Deva Priyakumar, Shahid Jameel bioRxiv, 10 , 176289 (2020) Links | BibTeX | Tags: publication @article{2b,
title = {The HIV-1 Vpu transmembrane domain topology and formation of a hydrophobic interface with BST-2 are critical for Vpu-mediated BST-2 downregulation},
author = {U. Deva Priyakumar},
url = {https://www.biorxiv.org/content/10.1101/2020.06.28.176289v1.abstract},
year = {2020},
date = {2020-01-01},
journal = {bioRxiv},
volume = {10},
pages = {176289},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 44. | Selectivity and transport in aquaporins from molecular simulation studies Journal Article U. Deva Priyakumar Siladitya Padhi, U. Deva Priyakumar Vitamins and Hormones , 112 , 47-70 (2020) Links | BibTeX | Tags: publication @article{4237486546,
title = {Selectivity and transport in aquaporins from molecular simulation studies},
author = {U. Deva Priyakumar},
url = {https://www.sciencedirect.com/science/article/pii/S0083672919300834},
year = {2020},
date = {2020-01-01},
journal = {Vitamins and Hormones },
volume = {112},
pages = {47-70},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 45. | Host metabolic reprogramming in response to SARS-Cov-2 infection Journal Article Vinod PK STR Moolamalla, Ruchi Chauhan, U Deva Priyakumar, PK Vinod bioRxiv, 10 , 232645 (2020) Links | BibTeX | Tags: publication @article{88,
title = {Host metabolic reprogramming in response to SARS-Cov-2 infection},
author = {Vinod PK},
url = {https://www.biorxiv.org/content/10.1101/2020.08.02.232645v1.abstract},
year = {2020},
date = {2020-01-01},
journal = {bioRxiv},
volume = {10},
pages = {232645},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2019
|
| 46. | Genome-wide characterization of copy number variations in diffuse large B-cell lymphoma with implications in targeted therapy Journal Article Nita Parekh Prashanthi Dharanipragada, Nita Parekh Precision Clinical Medicine, 2 , 246–258 (2019) Links | BibTeX | Tags: publication @article{44,
title = {Genome-wide characterization of copy number variations in diffuse large B-cell lymphoma with implications in targeted therapy},
author = {Nita Parekh},
url = {https://academic.oup.com/pcm/article/2/4/246/5637216},
year = {2019},
date = {2019-12-23},
journal = {Precision Clinical Medicine},
volume = {2},
pages = {246–258},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 47. | Determining P-Wave 45° Laboratory Acoustic Measurement using a Vertically Drilled Plug Journal Article Abhijit Mitra Akshay A Thombare, Munir Aldin, Deepak Gokaraju, Andreina Guedez, Sudarshan Govindarajan, Abhijit Mitra ISRM International Symposium on Geomechanics , 978-981 (2019) Links | BibTeX | Tags: publication @article{11d,
title = {Determining P-Wave 45° Laboratory Acoustic Measurement using a Vertically Drilled Plug},
author = {Abhijit Mitra},
url = {https://www.onepetro.org/conference-paper/ISRM-ISG-2019-04},
year = {2019},
date = {2019-12-13},
booktitle = {ISRM 8th International Symposium Geomechanics},
journal = {ISRM International Symposium on Geomechanics },
pages = {978-981},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 48. | Recent Advancements in Computing Reliable Binding Free Energies in Drug Discovery Projects Journal Article U. Deva Priyakumar N Arul Murugan, Vasanthanathan Poongavanam, U Deva Priyakumar Structural Bioinformatics: Applications in Preclinical Drug Discovery Process, 27 , 221-246 (2019) Links | BibTeX | Tags: publication @article{26b,
title = {Recent Advancements in Computing Reliable Binding Free Energies in Drug Discovery Projects},
author = {U. Deva Priyakumar},
url = {https://link.springer.com/chapter/10.1007/978-3-030-05282-9_7},
year = {2019},
date = {2019-11-29},
booktitle = {Structural Bioinformatics: Applications in Preclinical Drug Discovery Process},
journal = {Structural Bioinformatics: Applications in Preclinical Drug Discovery Process},
volume = {27},
pages = {221-246},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 49. | Multiple system‐level feedback loops control life‐and‐death decisions in endoplasmic reticulum stress Journal Article Vinod PK Orsolya Kapuy, Margita Márton, Gábor Bánhegyi, PK Vinod FEBS letters, 594 , 1112-1123 (2019) Links | BibTeX | Tags: publication @article{27,
title = {Multiple system‐level feedback loops control life‐and‐death decisions in endoplasmic reticulum stress},
author = {Vinod PK},
url = {https://febs.onlinelibrary.wiley.com/doi/full/10.1002/1873-3468.13689},
year = {2019},
date = {2019-11-26},
journal = {FEBS letters},
volume = {594},
pages = {1112-1123},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 50. | Hunting for scalar leptoquarks with boosted tops and light leptons Journal Article Subhadip Mitra Kushagra Chandak, Tanumoy Mandal, Subhadip Mitra Physical Review D, 100 , 075019 (2019) Links | BibTeX | Tags: publication @article{59,
title = {Hunting for scalar leptoquarks with boosted tops and light leptons},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.100.075019},
year = {2019},
date = {2019-10-18},
journal = {Physical Review D},
volume = {100},
pages = {075019},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
