2017
|
| 101. | Modeling complex biomolecular systems and processes using molecular mechanics force fields and molecular dynamics simulations Journal Article U. Deva Priyakumar SILADITYA Padhi, U Deva Priyakumar Theoretical and computational advances: From atoms to molecules to materials, 1 , 105-127) (2017) Links | BibTeX | Tags: publication @article{22m,
title = {Modeling complex biomolecular systems and processes using molecular mechanics force fields and molecular dynamics simulations},
author = { U. Deva Priyakumar},
url = {https://www.researchgate.net/publication/315517912_Modeling_Complex_Biomolecular_Systems_and_Processes_Using_Molecular_Mechanics_Force_Fields_and_Molecular_Dynamics_Simulations},
year = {2017},
date = {2017-08-16},
journal = {Theoretical and computational advances: From atoms to molecules to materials},
volume = {1},
pages = {105-127)},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 102. | How does mg2+ modulate the rna folding mechanism: A case study of the g: Cw: W trans basepair Journal Article Abhijit Mitra Antarip Halder, Rohit Roy, Dhananjay Bhattacharyya, Abhijit Mitra Biophysical journal, 113 , 277-289 (2017) Links | BibTeX | Tags: publication @article{11h,
title = {How does mg2+ modulate the rna folding mechanism: A case study of the g: Cw: W trans basepair},
author = { Abhijit Mitra},
url = {https://www.sciencedirect.com/science/article/pii/S0006349517304459},
year = {2017},
date = {2017-07-25},
journal = {Biophysical journal},
volume = {113},
pages = { 277-289},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 103. | Design of RF sensor for simultaneous detection of complex permeability and permittivity of unknown sample Journal Article Prabhakar Bhimalapuram Pratik Porwal, Syed Azeemuddin, Prabhakar Bhimalapuram, Tapan Kumar Sau Progress In Electromagnetics Research, 79 , 159-173 (2017) Links | BibTeX | Tags: publication @article{4k,
title = {Design of RF sensor for simultaneous detection of complex permeability and permittivity of unknown sample},
author = { Prabhakar Bhimalapuram},
url = {http://www.jpier.org/PIERC/pier.php?paper=17090401},
year = {2017},
date = {2017-07-13},
journal = {Progress In Electromagnetics Research},
volume = {79},
pages = {159-173},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 104. | Systems-level organization of non-alcoholic fatty liver disease progression network Journal Article Vinod PK K Shubham, L anky Vinay, Vinod PK Molecular BioSystems, 13 , 1898-1911 (2017) Links | BibTeX | Tags: publication @article{22p,
title = {Systems-level organization of non-alcoholic fatty liver disease progression network},
author = { Vinod PK},
url = {https://pubs.rsc.org/en/content/articlelanding/2017/mb/c7mb00013h/unauth#!divAbstract},
year = {2017},
date = {2017-07-13},
journal = {Molecular BioSystems},
volume = {13},
pages = {1898-1911},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 105. | Design of RF sensor for simultaneous detection of complex permeability and permittivity of unknown sample Journal Article Tapan Kumar Sau Pratik Porwal, Syed Azeemuddin, Prabhakar Bhimalapuram, Tapan Kumar Sau Progress In Electromagnetics Research, 79 , 159-173 (2017) Links | BibTeX | Tags: publication @article{4kb,
title = {Design of RF sensor for simultaneous detection of complex permeability and permittivity of unknown sample},
author = {Tapan Kumar Sau},
url = {http://www.jpier.org/PIERC/pier.php?paper=17090401},
year = {2017},
date = {2017-07-13},
journal = {Progress In Electromagnetics Research},
volume = {79},
pages = {159-173},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 106. | Higher order structures involving post transcriptionally modified nucleobases in RNA Journal Article Abhijit Mitra SP Preethi, Purshotam Sharma, Abhijit Mitra RSC advances, 7 , 35694-35703 (2017) Links | BibTeX | Tags: publication @article{1s,
title = {Higher order structures involving post transcriptionally modified nucleobases in RNA},
author = {Abhijit Mitra},
url = {https://pubs.rsc.org/en/content/articlehtml/2017/ra/c7ra05284g},
year = {2017},
date = {2017-07-12},
journal = {RSC advances},
volume = {7},
pages = {35694-35703},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 107. | THE JOURNAL OF CHEMICAL PHYSICS 146 , 214304 (2017) An alternative laser driven photodissociation mechanism of pyrrole via 1 πσ /S 0 conical intersection Journal Article Harjinder Singh Nandipati Krishna Reddy, Zhenzhang Lan,Harjinder Singh, Susanta Mahapatra THE JOURNAL OF CHEMICAL PHYSICS, 146 (21), 1133-1135 (2017) Links | BibTeX | Tags: publication @article{22q,
title = {THE JOURNAL OF CHEMICAL PHYSICS 146 , 214304 (2017) An alternative laser driven photodissociation mechanism of pyrrole via 1 πσ /S 0 conical intersection},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/252},
year = {2017},
date = {2017-06-14},
journal = {THE JOURNAL OF CHEMICAL PHYSICS},
volume = {146},
number = {21},
pages = {1133-1135},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 108. | Structural landscape of base pairs containing post-transcriptional modifications in RNA Journal Article Abhijit Mitra Preethi P Seelam, Purshotam Sharma, Abhijit Mitra RNA, 23 , 847-859 (2017) Links | BibTeX | Tags: publication @article{1r,
title = {Structural landscape of base pairs containing post-transcriptional modifications in RNA},
author = {Abhijit Mitra},
url = {https://rnajournal.cshlp.org/content/23/6/847.short},
year = {2017},
date = {2017-06-01},
journal = {RNA},
volume = {23},
pages = {847-859},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 109. | Direct Determination of Site-specific Noncovalent Interaction Strengths of Proteins from NMR-derived Fast Side Chain Motional Parameters Journal Article Marimuthu Krishnan Rajeshwar Tatikonda Rajitha, Marimuthu Krishnan Journal of Physical Chemistry B, 121 , 5174–5186 (2017) Links | BibTeX | Tags: publication @article{22o,
title = {Direct Determination of Site-specific Noncovalent Interaction Strengths of Proteins from NMR-derived Fast Side Chain Motional Parameters},
author = { Marimuthu Krishnan},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.7b01402},
year = {2017},
date = {2017-04-28},
journal = {Journal of Physical Chemistry B},
volume = {121},
pages = {5174–5186},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 110. | Temperature dependence of the stability of ion pair interactions, and its implications on the thermostability of proteins from thermophiles Journal Article U. Deva Priyakumar Swetha Bikkina, Agastya P Bhati, Siladitya Padhi, U Deva Priyakumar Journal of Chemical Sciences, 129 , 405-414 (2017) Links | BibTeX | Tags: publication @article{1u,
title = {Temperature dependence of the stability of ion pair interactions, and its implications on the thermostability of proteins from thermophiles},
author = { U. Deva Priyakumar},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/548},
year = {2017},
date = {2017-03-01},
journal = {Journal of Chemical Sciences},
volume = {129},
pages = {405-414},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 111. | Initial state-specific photodissociation dynamics of pyrrole via 1πσ∗/S0 conical intersection initiated with optimally controlled UV-laser pulses Journal Article Harjinder Singh K. R. Nandipati,Arun Kumar Kanakati,Harjinder Singh,Z. Lan, Susanta Mahapatra THE EUROPEAN PHYSICAL JOURNAL D, 71 (222), 336-339 (2017) Links | BibTeX | Tags: publication @article{1w,
title = {Initial state-specific photodissociation dynamics of pyrrole via 1πσ∗/S0 conical intersection initiated with optimally controlled UV-laser pulses},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/431},
year = {2017},
date = {2017-02-24},
journal = {THE EUROPEAN PHYSICAL JOURNAL D},
volume = {71},
number = {222},
pages = {336-339},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 112. | Controlling Nuclear and Electronic Motion in Molecules Journal Article Harjinder Singh Harjinder singh Proceedings of Theory Conference on "Ten Years of Excellence in Science: 2006 - 2016, 5 , 20-30 (2017) Links | BibTeX | Tags: Publications @article{1x,
title = {Controlling Nuclear and Electronic Motion in Molecules},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/inproceedings/1329},
year = {2017},
date = {2017-01-20},
journal = {Proceedings of Theory Conference on "Ten Years of Excellence in Science: 2006 - 2016},
volume = {5},
pages = {20-30},
address = {Proceedings of Theory Conference on "Ten Years of Excellence in Science: 2006 - 2016" (Theory Conference 2017)},
keywords = {Publications},
pubstate = {published},
tppubtype = {article}
}
|
| 113. | Reverse Watson-Crick purine-purine base pairs—the Sharp-turn motif and other structural consequences in functional RNAs Journal Article Abhijit Mitra Abhinav Mittal, Antarip Halder, Sohini Bhattacharya, Dhananjay Bhattacharyya, Abhijit Mitra bioRxiv, 098723 (2017) Links | BibTeX | Tags: publication @article{1t,
title = {Reverse Watson-Crick purine-purine base pairs—the Sharp-turn motif and other structural consequences in functional RNAs},
author = {Abhijit Mitra},
url = {https://www.biorxiv.org/content/10.1101/098723v1.abstract},
year = {2017},
date = {2017-01-01},
journal = {bioRxiv},
pages = {098723},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 114. | Microsecond simulation of human aquaporin 2 reveals structural determinants of water permeability and selectivity Journal Article U. Deva Priyakumar Siladitya Padhi, U Deva Priyakumar Biochimica et Biophysica Acta (BBA)-Biomembranes, 1859 , 10-16 (2017) Links | BibTeX | Tags: publication @article{22n,
title = {Microsecond simulation of human aquaporin 2 reveals structural determinants of water permeability and selectivity},
author = { U. Deva Priyakumar},
url = {https://www.sciencedirect.com/science/article/pii/S0005273616303443},
year = {2017},
date = {2017-01-01},
journal = {Biochimica et Biophysica Acta (BBA)-Biomembranes},
volume = {1859},
pages = {10-16},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2016
|
| 115. | Detection of biotin-streptavidin interaction using RF interdigitated capacitive cavity Journal Article Tapan Kumar Sau Pratik Porwal, Azeemuddin Syed, Prabhakar Bhimalapuram, Tapan Kumar Sau IEEE MTT-S International Microwave and RF Conference, 18 , 2377-9152 (2016) Links | BibTeX | Tags: publication @article{1y,
title = {Detection of biotin-streptavidin interaction using RF interdigitated capacitive cavity},
author = { Tapan Kumar Sau},
url = {https://ieeexplore.ieee.org/abstract/document/7939624},
year = {2016},
date = {2016-12-05},
journal = {IEEE MTT-S International Microwave and RF Conference},
volume = {18},
pages = {2377-9152},
publisher = {IEEE},
address = {2016 IEEE MTT-S International Microwave and RF Conference (IMaRC)},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 116. | Detection of biotin-streptavidin interaction using RF interdigitated capacitive cavity Journal Article Tapan Kumar Sau Pratik Porwal, Azeemuddin Syed, Prabhakar Bhimalapuram, Tapan Kumar Sau IEEE MTT-S International Microwave and RF Conference, 18 , 2377-9152 (2016) Links | BibTeX | Tags: publication @article{1yb,
title = {Detection of biotin-streptavidin interaction using RF interdigitated capacitive cavity},
author = {Tapan Kumar Sau},
url = {https://ieeexplore.ieee.org/abstract/document/7939624},
year = {2016},
date = {2016-12-05},
journal = {IEEE MTT-S International Microwave and RF Conference},
volume = {18},
pages = {2377-9152},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 117. | Urea mimics nucleobases by preserving the helical integrity of B-DNA duplexes via hydrogen bonding and stacking interactions Journal Article U. Deva Priyakumar Gorle Suresh, Siladitya Padhi, Indrajit Patil, U Deva Priyakumar Biochemistry, 55 , 5653–5664 (2016) Links | BibTeX | Tags: publication @article{22v,
title = {Urea mimics nucleobases by preserving the helical integrity of B-DNA duplexes via hydrogen bonding and stacking interactions},
author = { U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.biochem.6b00309},
year = {2016},
date = {2016-10-11},
journal = {Biochemistry},
volume = {55},
pages = { 5653–5664},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 118. | Urea–aromatic stacking and concerted urea transport: conserved mechanisms in urea transporters revealed by molecular dynamics Journal Article U. Deva Priyakumar Siladitya Padhi, U Deva Priyakumar Journal of chemical theory and computation, 12 , 5190-5200 (2016) Links | BibTeX | Tags: publication @article{22w,
title = {Urea–aromatic stacking and concerted urea transport: conserved mechanisms in urea transporters revealed by molecular dynamics},
author = { U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jctc.6b00602},
year = {2016},
date = {2016-10-11},
journal = {Journal of chemical theory and computation},
volume = {12},
pages = {5190-5200},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 119. | Effects of point mutations on the thermostability of B. subtilis lipase: investigating nonadditivity Journal Article Abhijit Mitra Bipin Singh, Gopalakrishnan Bulusu, Abhijit Mitra Journal of computer-aided molecular design, 30 , 899–916 (2016) Links | BibTeX | Tags: publication @article{22r,
title = {Effects of point mutations on the thermostability of B. subtilis lipase: investigating nonadditivity},
author = { Abhijit Mitra},
url = {https://link.springer.com/article/10.1007/s10822-016-9978-0},
year = {2016},
date = {2016-10-01},
journal = {Journal of computer-aided molecular design},
volume = {30},
pages = {899–916},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 120. | Regulatory checkpoint remodeling during experimental evolution of flagellar motility Journal Article Bhaswar Ghosh Bin Ni, Bhaswar Ghosh, Ferencz S. Pop, Remy Colin, Thomas Heimerl, Victor Sourjik Cell Report, 18 , 1–12 (2016) BibTeX | Tags: publication @article{1_91,
title = {Regulatory checkpoint remodeling during experimental evolution of flagellar motility},
author = {Bhaswar Ghosh},
year = {2016},
date = {2016-09-14},
journal = {Cell Report},
volume = {18},
pages = {1–12},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 121. | Sugar Influx Sensing by the Phosphotransferase System of Escherichia coli. Journal Article Bhaswar Ghosh
Somavanshi R, Bhaswar Ghosh, Sourjik V PLoS Biol, 14 (8), e2000074. (2016) Links | BibTeX | Tags: publication @article{1_92,
title = {Sugar Influx Sensing by the Phosphotransferase System of Escherichia coli.},
author = {Bhaswar Ghosh
},
url = {https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2000074},
year = {2016},
date = {2016-08-24},
journal = {PLoS Biol},
volume = {14},
number = {8},
pages = {e2000074.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 122. | Structure, interaction, and dynamics of Au/Pd bimetallic nanoalloys dispersed in aqueous ethylpyrrolidone, a monomeric moiety of polyvinylpyrrolidone Journal Article U. Deva Priyakumar Aditi Gupta, Bundet Boekfa, Hidehiro Sakurai, Masahiro Ehara, U. Deva Priyakumar The Journal of Physical Chemistry C, 120 , 17454–17464 (2016) Links | BibTeX | Tags: publication @article{22x,
title = {Structure, interaction, and dynamics of Au/Pd bimetallic nanoalloys dispersed in aqueous ethylpyrrolidone, a monomeric moiety of polyvinylpyrrolidone},
author = {U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jpcc.6b05097},
year = {2016},
date = {2016-08-11},
journal = {The Journal of Physical Chemistry C},
volume = {120},
pages = {17454–17464},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 123. | Observing Ultra‐Small Gold Cluster to Plasmonic Nanoparticle Evolution in a One‐Pot Aqueous Synthesis Journal Article Tapan kumar Sau Shweta Bhardwaj, Ramakrishna Itteboina, Tapan kumar Sau ChemistrySelect, 1 , 3091-3096 (2016) Links | BibTeX | Tags: publication @article{22u,
title = {Observing Ultra‐Small Gold Cluster to Plasmonic Nanoparticle Evolution in a One‐Pot Aqueous Synthesis},
author = {Tapan kumar Sau},
url = {https://chemistry-europe.onlinelibrary.wiley.com/doi/10.1002/slct.201600778},
year = {2016},
date = {2016-08-01},
journal = {ChemistrySelect},
volume = {1},
pages = {3091-3096},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 124. | Probing compositeness with the CMS eejj & eej data Journal Article Subhadip Mitra Tanumoy Mandal, Subhadip Mitra, Satyajit Seth Physics Letters B, 758 , 219-225 (2016) Links | BibTeX | Tags: publication @article{1_26,
title = {Probing compositeness with the CMS eejj & eej data},
author = {Subhadip Mitra},
url = {https://www.sciencedirect.com/science/article/pii/S0370269316301678},
year = {2016},
date = {2016-07-10},
journal = {Physics Letters B},
volume = {758},
pages = {219-225},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 125. | NAPS: Network analysis of protein structures Journal Article Nita Parekh Broto Chakrabarty, Nita Parekh Nucleic acids research, 44 , W375–W382 (2016) Links | BibTeX | Tags: publication @article{22s,
title = {NAPS: Network analysis of protein structures},
author = {Nita Parekh},
url = {https://academic.oup.com/nar/article/44/W1/W375/2499361},
year = {2016},
date = {2016-07-08},
journal = {Nucleic acids research},
volume = {44},
pages = {W375–W382},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 126. | Ligand-induced stabilization of a duplex-like architecture is crucial for the switching mechanism of the SAM-III riboswitch Journal Article U. Deva Priyakumar Gorle Suresh, Harini Srinivasan, Shivani Nanda, U. Deva Priyakumar Biochemistry, 55 , 3349–3360 (2016) Links | BibTeX | Tags: publication @article{22y,
title = {Ligand-induced stabilization of a duplex-like architecture is crucial for the switching mechanism of the SAM-III riboswitch},
author = { U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.biochem.5b00973},
year = {2016},
date = {2016-06-21},
journal = {Biochemistry},
volume = {55},
pages = {3349–3360},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 127. | Cooperation of hydrophobic gating, knock-on effect, and ion binding determines ion selectivity in the p7 channel Journal Article U. Deva Priyakumar Siladitya Padhi, U. Deva Priyakumar The Journal of Physical Chemistry B, 120 , 4351–4356 (2016) Links | BibTeX | Tags: publication @article{22z,
title = {Cooperation of hydrophobic gating, knock-on effect, and ion binding determines ion selectivity in the p7 channel},
author = { U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6b00684},
year = {2016},
date = {2016-05-19},
journal = {The Journal of Physical Chemistry B},
volume = {120},
pages = {4351–4356},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 128. | Dynamic ligand-based pharmacophore modeling and virtual screening to identify mycobacterial cyclopropane synthase inhibitors Journal Article U. Deva Priyakumar Chinmayee Choudhury, U. Deva Priyakumar, G Narahari Sastry Journal of Chemical Sciences, 128 , 719–732 (2016) Links | BibTeX | Tags: publication @article{22_26,
title = {Dynamic ligand-based pharmacophore modeling and virtual screening to identify mycobacterial cyclopropane synthase inhibitors},
author = {U. Deva Priyakumar},
url = {https://link.springer.com/article/10.1007/s12039-016-1069-1},
year = {2016},
date = {2016-05-01},
journal = {Journal of Chemical Sciences},
volume = {128},
pages = {719–732},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 129. | Structural and Functional Diversities of the Hexadecahydro‐1H‐cyclopenta [a] phenanthrene Framework, a Ubiquitous Scaffold in Steroidal Hormones Journal Article U. Deva Priyakumar Chinmayee Choudhury, U. Deva Priyakumar, G Narahari Sastry Molecular Informatics, 35 , 145-157 (2016) Links | BibTeX | Tags: publication @article{22_27,
title = {Structural and Functional Diversities of the Hexadecahydro‐1H‐cyclopenta [a] phenanthrene Framework, a Ubiquitous Scaffold in Steroidal Hormones},
author = {U. Deva Priyakumar},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/minf.201600005},
year = {2016},
date = {2016-04-07},
journal = {Molecular Informatics},
volume = {35},
pages = {145-157},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 130. | Ability of density functional theory methods to accurately model the reaction energy pathways of the oxidation of CO on gold cluster: A benchmark study Journal Article U. Deva Priyakumar Saumya Gurtu, Sandhya Rai, Masahiro Ehara, U. Deva Priyakumar Theoretical Chemistry Accounts, 135 , 6693-7512 (2016) Links | BibTeX | Tags: publication @article{22_28,
title = {Ability of density functional theory methods to accurately model the reaction energy pathways of the oxidation of CO on gold cluster: A benchmark study},
author = {U. Deva Priyakumar},
url = {https://link.springer.com/article/10.1007/s00214-016-1852-6},
year = {2016},
date = {2016-04-01},
journal = {Theoretical Chemistry Accounts},
volume = {135},
pages = {6693-7512},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 131. | Copy number variation detection workflow using next generation sequencing data Journal Article Nita Parekh Prashanthi Dharanipragada, Nita Parekh BMC Bioinformatics, 15 , 55-60 (2016) Links | BibTeX | Tags: publication @article{22t,
title = {Copy number variation detection workflow using next generation sequencing data},
author = {Nita Parekh},
url = {https://ieeexplore.ieee.org/abstract/document/7552117},
year = {2016},
date = {2016-03-04},
journal = {BMC Bioinformatics},
volume = {15},
pages = {55-60},
publisher = {IEEE},
address = {2016 International Conference on Bioinformatics and Systems Biology (BSB)},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 132. | Pair production of scalar leptoquarks at the LHC to NLO parton shower accuracy Journal Article Subhadip Mitra Tanumoy Mandal, Subhadip Mitra, Satyajit Seth Physical Review D, 93 , 035018 (2016) Links | BibTeX | Tags: publication @article{1_28,
title = {Pair production of scalar leptoquarks at the LHC to NLO parton shower accuracy},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.93.035018},
year = {2016},
date = {2016-02-17},
journal = {Physical Review D},
volume = {93},
pages = {035018},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 133. | Non-relativistic matter and dark energy in a quantum conformal model Journal Article Subhadip Mitra Gopal Kashyap, Pankaj Jain, Subhadip Mitra Astroparticle Physics, 75 , 64-71 (2016) Links | BibTeX | Tags: publication @article{1_29,
title = {Non-relativistic matter and dark energy in a quantum conformal model},
author = {Subhadip Mitra},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0927650515001632},
year = {2016},
date = {2016-02-15},
journal = {Astroparticle Physics},
volume = {75},
pages = { 64-71},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 134. | Molecular Origins of Polymer-Coupled Helical Motion of Ions in a Crystalline Polymer Electrolyte Journal Article Marimuthu Krishnan Ramesh Cheerla, Marimuthu Krishnan Macromolecules, 49 , 700–707 (2016) Links | BibTeX | Tags: publication @article{1z,
title = {Molecular Origins of Polymer-Coupled Helical Motion of Ions in a Crystalline Polymer Electrolyte},
author = {Marimuthu Krishnan},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.macromol.5b02197},
year = {2016},
date = {2016-01-14},
journal = {Macromolecules},
volume = {49},
pages = {700–707},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2015
|
| 135. | Sumoylation of Sir2 differentially regulates transcriptional silencing in yeast Journal Article U. Deva Priyakumar Abdul Hannan, Neethu Maria Abraham, Siddharth Goyal, Imlitoshi Jamir, U. Deva Priyakumar, Krishnaveni Mishra Nucleic acids research, 43 , 10213–10226 (2015) Links | BibTeX | Tags: publication @article{22_29,
title = {Sumoylation of Sir2 differentially regulates transcriptional silencing in yeast},
author = {U. Deva Priyakumar},
url = {https://academic.oup.com/nar/article/43/21/10213/2468108},
year = {2015},
date = {2015-12-02},
journal = {Nucleic acids research},
volume = {43},
pages = {10213–10226},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 136. | Modeling the structure of SARS 3a transmembrane protein using a minimum unfavorable contact approach Journal Article U. Deva Priyakumar S Ramakrishna, Siladitya Padhi, U. Deva Priyakumar Journal of Chemical Sciences, 127 , 2159-2169 (2015) Links | BibTeX | Tags: publication @article{22_30,
title = {Modeling the structure of SARS 3a transmembrane protein using a minimum unfavorable contact approach},
author = {U. Deva Priyakumar},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/545},
year = {2015},
date = {2015-12-01},
journal = {Journal of Chemical Sciences},
volume = {127},
pages = {2159-2169},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 137. | The fine tuning of the cosmological constant in a conformal model Journal Article Subhadip Mitra Pankaj Jain, Gopal Kashyap, Subhadip Mitra International Journal of Modern Physics A, 30 , 1550171 (2015) Links | BibTeX | Tags: publication @article{1_41,
title = {The fine tuning of the cosmological constant in a conformal model},
author = {Subhadip Mitra},
url = {https://www.worldscientific.com/doi/abs/10.1142/S0217751X15501717},
year = {2015},
date = {2015-11-20},
journal = {International Journal of Modern Physics A},
volume = {30},
pages = {1550171},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 138. | On a boundary-localized Higgs boson in 5D theories Journal Article Subhadip Mitra Roberto Barceló, Subhadip Mitra, Grégory Moreau The European Physical Journal C, 75 , 527 (2015) Links | BibTeX | Tags: publication @article{59e,
title = {On a boundary-localized Higgs boson in 5D theories},
author = {Subhadip Mitra},
url = {https://link.springer.com/article/10.1140/epjc/s10052-015-3756-3},
year = {2015},
date = {2015-11-01},
journal = {The European Physical Journal C},
volume = {75},
pages = {527},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 139. | ELKO fermions as dark matter candidates Journal Article Subhadip Mitra Bakul Agarwal, Pankaj Jain, Subhadip Mitra, Alekha C Nayak, Ravindra K Verma Physical Review D, 92 , 075027 (2015) Links | BibTeX | Tags: publication @article{23m,
title = {ELKO fermions as dark matter candidates},
author = {Subhadip Mitra},
url = {https://journals.aps.org/prd/abstract/10.1103/PhysRevD.92.075027},
year = {2015},
date = {2015-10-20},
journal = {Physical Review D},
volume = {92},
pages = {075027},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 140. | Molecular dynamics study of the structure, flexibility, and hydrophilicity of PETIM dendrimers: a comparison with PAMAM dendrimers Journal Article U. Deva Priyakumar Subbarao Kanchi, Gorle Suresh, U. Deva Priyakumar, KG Ayappa, Prabal K Maiti The Journal of Physical Chemistry B, 119 , 12990–13001 (2015) Links | BibTeX | Tags: publication @article{1_34,
title = {Molecular dynamics study of the structure, flexibility, and hydrophilicity of PETIM dendrimers: a comparison with PAMAM dendrimers},
author = {U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.jpcb.5b07124},
year = {2015},
date = {2015-10-15},
journal = {The Journal of Physical Chemistry B},
volume = {119},
pages = {12990–13001},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 141. | Atomistic details of the molecular recognition of DNA-RNA hybrid duplex by ribonuclease H enzyme Journal Article U. Deva Priyakumar Gorle Suresh, U. Deva Priyakumar Journal of Chemical Sciences, 127 , 1701-1713 (2015) Links | BibTeX | Tags: Publications @article{22_31,
title = {Atomistic details of the molecular recognition of DNA-RNA hybrid duplex by ribonuclease H enzyme},
author = {U. Deva Priyakumar},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/543},
year = {2015},
date = {2015-10-01},
journal = {Journal of Chemical Sciences},
volume = {127},
pages = {1701-1713},
keywords = {Publications},
pubstate = {published},
tppubtype = {article}
}
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| 142. | Supercritical Carbon Dioxide at Smectite Mineral-Water Interfaces: Molecular Dynamics and Adaptive Biasing Force Investigation of CO2/H2O Mixtures Nanoconfined in Na … Journal Article Marimuthu Krishnan Mohan Maruthi Sena, Christin P. Morrow, R. James James Kirkpatrick, Marimuthu Krishnan Chemistry of Materials, 27 , 6946–6959 (2015) Links | BibTeX | Tags: publication @article{1_39,
title = {Supercritical Carbon Dioxide at Smectite Mineral-Water Interfaces: Molecular Dynamics and Adaptive Biasing Force Investigation of CO2/H2O Mixtures Nanoconfined in Na …},
author = {Marimuthu Krishnan},
url = {https://pubs.acs.org/doi/abs/10.1021/acs.chemmater.5b01855},
year = {2015},
date = {2015-09-30},
journal = {Chemistry of Materials},
volume = {27},
pages = { 6946–6959},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 143. | Robustness of Chimera States in Non-locally Coupled Logistic Maps Journal Article Nita Parekh B Pranneetha, Nita Parekh The Chaotic Modeling and Simulation Journal, 2 , 012217 (2015) Links | BibTeX | Tags: publication @article{1_32,
title = {Robustness of Chimera States in Non-locally Coupled Logistic Maps},
author = {Nita Parekh},
url = {https://journals.aps.org/pre/abstract/10.1103/PhysRevE.98.012217},
year = {2015},
date = {2015-09-09},
journal = {The Chaotic Modeling and Simulation Journal},
volume = {2},
pages = { 012217},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 144. | The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs Journal Article Abhijit Mitra Antarip Halder, Sohini Bhattacharya, Ayan Datta, Dhananjay Bhattacharyya, Abhijit Mitra Physical Chemistry Chemical Physics, 17 , 26249-26263 (2015) Links | BibTeX | Tags: publication @article{23f,
title = {The role of N7 protonation of guanine in determining the structure, stability and function of RNA base pairs},
author = {Abhijit Mitra},
url = {https://pubs.rsc.org/en/content/articlelanding/2015/cp/c5cp04894j/unauth#!divAbstract},
year = {2015},
date = {2015-09-08},
journal = {Physical Chemistry Chemical Physics},
volume = {17},
pages = {26249-26263},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 145. | Inclusion of methoxy groups inverts the thermodynamic stabilities of DNA–RNA hybrid duplexes: A molecular dynamics simulation study Journal Article U. Deva Priyakumar Gorle Suresh, U. Deva Priyakumar Journal of Molecular Graphics and Modelling, 61 , 150-159 (2015) Links | BibTeX | Tags: publication @article{1_36,
title = {Inclusion of methoxy groups inverts the thermodynamic stabilities of DNA–RNA hybrid duplexes: A molecular dynamics simulation study},
author = {U. Deva Priyakumar},
url = {https://www.sciencedirect.com/science/article/pii/S1093326315300322},
year = {2015},
date = {2015-09-01},
journal = {Journal of Molecular Graphics and Modelling},
volume = {61},
pages = {150-159},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
| 146. | Nucleobases tagged to gold nanoclusters cause a mechanistic crossover in the oxidation of CO Journal Article U. Deva Priyakumar Sandhya Rai, Masahiro Ehara, U. Deva Priyakumar Physical Chemistry Chemical Physics, 17 , 24275-24281 (2015) Links | BibTeX | Tags: publication @article{23j,
title = {Nucleobases tagged to gold nanoclusters cause a mechanistic crossover in the oxidation of CO},
author = {U. Deva Priyakumar},
url = {https://pubs.rsc.org/ko/content/articlelanding/2015/cp/c5cp04273a/unauth#!divAbstract},
year = {2015},
date = {2015-08-18},
journal = {Physical Chemistry Chemical Physics},
volume = {17},
pages = {24275-24281},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 147. | Double zipper helical assembly of deoxyoligonucleotides: mutual templating and chiral imprinting to form hybrid DNA ensembles Journal Article U. Deva Priyakumar Nagarjun Narayanaswamy, Gorle Suresh, U. Deva Priyakumar, T Govindaraju Chemical Communications, 51 , 5493-5496 (2015) Links | BibTeX | Tags: publication @article{22_34,
title = {Double zipper helical assembly of deoxyoligonucleotides: mutual templating and chiral imprinting to form hybrid DNA ensembles},
author = {U. Deva Priyakumar},
url = {https://pubs.rsc.org/en/content/articlelanding/2014/cc/c4cc06759b/unauth#!divAbstract},
year = {2015},
date = {2015-08-05},
journal = {Chemical Communications},
volume = {51},
pages = {5493-5496 },
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 148. | Functional characterization of drought-responsive modules and genes in Oryza sativa: a network-based approach Journal Article Nita Parekh Sanchari Sircar, Nita Parekh Frontiers in genetics, 6 , 3389 (2015) Links | BibTeX | Tags: publication @article{1_33,
title = {Functional characterization of drought-responsive modules and genes in Oryza sativa: a network-based approach},
author = {Nita Parekh},
url = {https://www.frontiersin.org/articles/10.3389/fgene.2015.00256/full},
year = {2015},
date = {2015-07-30},
journal = {Frontiers in genetics},
volume = {6},
pages = {3389},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 149. | Structure, Energetics, and Dynamics of Supercritical Carbon Dioxide at Smectite Mineral-Water Interfaces: Molecular Dynamics Modeling and Adaptive Force Investigation of CO2 … Journal Article Marimuthu Krishnan MM Sena, CP Morrow, RJ Kirkpatrick, Marimuthu Krishnan Chem. Mater, 27 , 2256-3100 (2015) Links | BibTeX | Tags: publication @article{23k,
title = {Structure, Energetics, and Dynamics of Supercritical Carbon Dioxide at Smectite Mineral-Water Interfaces: Molecular Dynamics Modeling and Adaptive Force Investigation of CO2 …},
author = {Marimuthu Krishnan},
url = {https://scholar.google.com/scholar?cluster=11744977310566119152&hl=en&oi=scholarr},
year = {2015},
date = {2015-07-07},
journal = {Chem. Mater},
volume = {27},
pages = {2256-3100},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
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| 150. | NMR and computational molecular modeling studies of mineral surfaces and interlayer galleries: A review Journal Article Marimuthu Krishnan R James Kirkpatrick, Andrey G Kalinichev, Geoffrey M Bowers, A Özgür Yazaydin, Marimuthu Krishnan, Moumita Saharay, Christin P Morrow American Mineralogist, 100 , 1341–1354 (2015) Links | BibTeX | Tags: publication @article{1_40,
title = {NMR and computational molecular modeling studies of mineral surfaces and interlayer galleries: A review},
author = {Marimuthu Krishnan},
url = {https://pubs.geoscienceworld.org/msa/ammin/article-abstract/100/7/1341/40477/NMR-and-computational-molecular-modeling-studies?redirectedFrom=fulltext},
year = {2015},
date = {2015-07-01},
journal = {American Mineralogist},
volume = {100},
pages = {1341–1354},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
