2008
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301. | Positive feedback and noise activate the stringent response regulator Rel in mycobacteria Journal Article Bhaswar Ghosh Sureka K, Bhaswar Ghosh,Dasgupta A, Basu J, Kundu M and Bose I PLoS One, 3 , e1771 (2008) Links | BibTeX | Tags: publication @article{2_169,
title = { Positive feedback and noise activate the stringent response regulator Rel in mycobacteria},
author = {Bhaswar Ghosh},
url = {https://pubmed.ncbi.nlm.nih.gov/18335046/},
year = {2008},
date = {2008-03-12},
journal = {PLoS One},
volume = {3},
pages = {e1771},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
302. | How the nature of an observation affects single-trajectory entropies Journal Article Prabhakar Bhimalapuram Ying Li, Tong Zhao, Prabhakar Bhimalapuram, Aaron R Dinner The Journal of chemical physics, 128 , 074102 (2008) Links | BibTeX | Tags: publication @article{1_78,
title = {How the nature of an observation affects single-trajectory entropies},
author = {Prabhakar Bhimalapuram},
url = {https://aip.scitation.org/doi/abs/10.1063/1.2828505},
year = {2008},
date = {2008-02-21},
journal = {The Journal of chemical physics},
volume = {128},
pages = {074102},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
303. | Atomic Detail Investigation of the Structure and Dynamics of DNA• RNA Hybrids: A Molecular Dynamics Study Journal Article U. Deva Priyakumar U Deva Priyakumar, Alexander D MacKerell The Journal of Physical Chemistry B, 112 , 1515–1524 (2008) Links | BibTeX | Tags: publication @article{33e,
title = {Atomic Detail Investigation of the Structure and Dynamics of DNA• RNA Hybrids: A Molecular Dynamics Study},
author = {U. Deva Priyakumar},
url = {https://pubs.acs.org/doi/abs/10.1021/jp709827m},
year = {2008},
date = {2008-02-07},
journal = {The Journal of Physical Chemistry B},
volume = {112},
pages = {1515–1524},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
304. | Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies Journal Article Harjinder Singh Purshotam Sharma, Abhijit Mitra, Sitansh Sharma, Harjinder Singh Journal of Chemical Sciences, 119 (6), 1-9 (2008) Links | BibTeX | Tags: publication @article{22_92b,
title = {Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies},
author = {Harjinder Singh},
url = {https://link.springer.com/article/10.1007/s12039-007-0066-9},
year = {2008},
date = {2008-02-06},
journal = {Journal of Chemical Sciences},
volume = {119},
number = {6},
pages = {1-9},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2007
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305. | Preferential cyclotrimerization of 5-(aminomethyl)-2-furancarboxylic acid (AMFC): Electrostatic and orbital interaction studies Journal Article Harjinder Singh Monika Sharma,Praveen Kumar,Harjinder Singh,Tushar K Chakraborty Journal of Molecular Structure: THEOCHEM, 764 , 109-115 (2007) Links | BibTeX | Tags: publication @article{22_94,
title = {Preferential cyclotrimerization of 5-(aminomethyl)-2-furancarboxylic acid (AMFC): Electrostatic and orbital interaction studies},
author = {Harjinder Singh},
url = {https://www.sciencedirect.com/science/article/abs/pii/S016612800600100X},
year = {2007},
date = {2007-12-28},
journal = {Journal of Molecular Structure: THEOCHEM},
volume = {764},
pages = { 109-115},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
306. | Binding of gold Nanoclusters with size-expanded DNA bases: A computational study of structural and electronic properties Journal Article Harjinder Singh Purshotam Sharma,Himanshu singh,Sitansh Sharma,Harjinder Singh J.Chem. Theory Comput., 3 , 2301-3-2311 (2007) Links | BibTeX | Tags: publication @article{77c,
title = {Binding of gold Nanoclusters with size-expanded DNA bases: A computational study of structural and electronic properties},
author = {Harjinder Singh},
url = {https://pubs.acs.org/doi/10.1021/ct700145e},
year = {2007},
date = {2007-10-16},
journal = {J.Chem. Theory Comput.},
volume = {3},
pages = {2301-3-2311},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
307. | Controlling dynamics in diatomic systems Journal Article Harjinder Singh Praveen Kumar,Harjinder Singh J. Chem. Sci., 119 , 3-9 (2007) Links | BibTeX | Tags: publication @article{66d,
title = {Controlling dynamics in diatomic systems},
author = {Harjinder Singh},
url = {https://www.researchgate.net/publication/250674185_Controlling_dynamics_in_diatomic_systems},
year = {2007},
date = {2007-09-19},
journal = {J. Chem. Sci.},
volume = {119},
pages = {3-9},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
308. | Quantum control of vibrational excitations in a heteronucler diatomic molecule Journal Article Harjinder Singh Sitansh Sharma,Purshotam Sharma,Harjinder Singh J. Chem. Sci, 119 , 433440. (2007) Links | BibTeX | Tags: publication @article{88c,
title = {Quantum control of vibrational excitations in a heteronucler diatomic molecule},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/17},
year = {2007},
date = {2007-09-13},
journal = {J. Chem. Sci},
volume = {119},
pages = {433440.},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
309. | Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies Journal Article Abhijit Mitra Purshotam Sharma, Abhijit Mitra, Sitansh Sharma, Harjinder Singh Journal of Chemical Sciences, 119 , 1-6 (2007) Links | BibTeX | Tags: publication @article{22_92,
title = {Base pairing in RNA structures: A computational analysis of structural aspects and interaction energies},
author = {Abhijit Mitra},
url = {https://link.springer.com/article/10.1007/s12039-007-0066-9},
year = {2007},
date = {2007-09-01},
journal = {Journal of Chemical Sciences},
volume = {119},
pages = {1-6},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
310. | The p53-MDM2 network: from oscillations to apoptosis Journal Article Bhaswar Ghosh Indrani Bose , Bhaswar Ghosh Journal of Bioscience, 32 , 991-997 (2007) Links | BibTeX | Tags: publication @article{2_170,
title = {The p53-MDM2 network: from oscillations to apoptosis },
author = {Bhaswar Ghosh},
url = {https://pubmed.ncbi.nlm.nih.gov/17914240/},
year = {2007},
date = {2007-08-22},
journal = {Journal of Bioscience},
volume = {32},
pages = {991-997},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
311. | Theoretical analysis of noncanonical base pairing interactions in RNA molecules Journal Article Abhijit Mitra Dhananjay Bhattacharyya, Siv Chand Koripella, Abhijit Mitra, Vijay Babu Rajendran, Bhabdyuti Sinha Journal of biosciences, 32 , 809–825 (2007) Links | BibTeX | Tags: publication @article{1_84,
title = {Theoretical analysis of noncanonical base pairing interactions in RNA molecules},
author = {Abhijit Mitra},
url = {https://link.springer.com/article/10.1007/s12038-007-0082-4},
year = {2007},
date = {2007-08-01},
journal = {Journal of biosciences},
volume = {32},
pages = {809–825},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
312. | Enthalpy entropy compensation during thermal degradation Journal Article Harjinder Singh Shalini Gaur Rudra,Harjinder Singh,Santanu Basu,U S Shivhare Journals of Food Engineering, 86 , 379-387 (2007) Links | BibTeX | Tags: publication @article{99b,
title = {Enthalpy entropy compensation during thermal degradation},
author = {Harjinder Singh},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0260877407005420},
year = {2007},
date = {2007-07-11},
journal = {Journals of Food Engineering},
volume = {86},
pages = {379-387},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
313. | Molecular Dynamics Studies to Investigate Thermostability of Mutants of B.subtilis Lipase Journal Article Abhijit Mitra Ramya Cherukupalli,MONIKA SHARMA,N. Madhusudan Rao,Harjinder Singh,Abhijit Mitra 1-7 (2007) Links | BibTeX | Tags: publication @article{22_93,
title = {Molecular Dynamics Studies to Investigate Thermostability of Mutants of B.subtilis Lipase},
author = {Abhijit Mitra},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/inproceedings/1984},
year = {2007},
date = {2007-07-02},
pages = {1-7},
organization = {Bioconvene 2007, International conference on Bioinformatics and Drug Discovery, University of Hyderabad, Hyderabad},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
314. | Molecular Dynamics Studies to Investigate Thermostability of Mutants of B.subtilis Lipase Journal Article Harjinder Singh Ramya Cherukupalli,MONIKA SHARMA,N. Madhusudan Rao,Harjinder Singh,Abhijit Mitra 1-5 (2007) Links | BibTeX | Tags: publication @article{22_93b,
title = {Molecular Dynamics Studies to Investigate Thermostability of Mutants of B.subtilis Lipase},
author = {Harjinder Singh},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/inproceedings/1984},
year = {2007},
date = {2007-07-02},
pages = {1-5},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
315. | Quantum Chemical Studies of Structures and binding in Noncanonical RNA Base pairs: The Trans Watson Crick/Watson-Crick family Journal Article Abhijit Mitra Abhijit Mitra,Harjinder Singh,Purshotam Sharma,Sitansh Sharma,Dhananjay Bhattacharyya Journal of Biomolecular Structure and Dynamics, 25 , 1-9 (2007) Links | BibTeX | Tags: publication @article{99c,
title = {Quantum Chemical Studies of Structures and binding in Noncanonical RNA Base pairs: The Trans Watson Crick/Watson-Crick family},
author = {Abhijit Mitra},
url = {https://pubmed.ncbi.nlm.nih.gov/18399704/},
year = {2007},
date = {2007-06-13},
journal = { Journal of Biomolecular Structure and Dynamics},
volume = {25},
pages = {1-9},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
316. | Quantum Chemical Studies of Structures and binding in Noncanonical RNA Base pairs: The Trans Watson Crick/Watson-Crick family Journal Article Harjinder Singh Abhijit Mitra,Harjinder Singh,Purshotam Sharma,Sitansh Sharma,Dhananjay Bhattacharyya Journal of Biomolecular Structure and Dynamics, 25 , 1-9 (2007) Links | BibTeX | Tags: publication @article{99cd,
title = {Quantum Chemical Studies of Structures and binding in Noncanonical RNA Base pairs: The Trans Watson Crick/Watson-Crick family},
author = {Harjinder Singh},
url = {https://pubmed.ncbi.nlm.nih.gov/18399704/},
year = {2007},
date = {2007-06-13},
journal = { Journal of Biomolecular Structure and Dynamics},
volume = {25},
pages = {1-9},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2006
|
317. | Gene Copy Number and Cell Cycle Arrest Journal Article Bhaswar Ghosh Bhaswar Ghosh and Bose I Physical Biology, 3 , 29-36 (2006) Links | BibTeX | Tags: publication @article{2_171,
title = { Gene Copy Number and Cell Cycle Arrest },
author = {Bhaswar Ghosh},
url = {https://pubmed.ncbi.nlm.nih.gov/16582459/},
year = {2006},
date = {2006-12-16},
journal = {Physical Biology},
volume = {3},
pages = {29-36},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
318. | Non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis Journal Article Abhijit Mitra Jhuma Das, Shayantani Mukherjee, Abhijit Mitra, Dhananjay Bhattacharyya Journal of Biomolecular Structure and Dynamics, 24 , 1-12 (2006) Links | BibTeX | Tags: publication @article{33g,
title = {Non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis},
author = {Abhijit Mitra},
url = {https://www.tandfonline.com/doi/abs/10.1080/07391102.2006.10507108},
year = {2006},
date = {2006-10-01},
journal = {Journal of Biomolecular Structure and Dynamics},
volume = {24},
pages = {1-12},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
319. | Thermische und photochemische Umwandlungen von Hetero‐1, 3, 5‐hexatrienen in fünfgliedrige Ringe mögliche pericyclische Reaktionen Journal Article Abhijit Mitra Manapurathu V George, Abijit Mitra, Kutikat B Sukumaran Angewandte Chemie, 92 , 1005-1014 (2006) Links | BibTeX | Tags: publication @article{12c,
title = {Thermische und photochemische Umwandlungen von Hetero‐1, 3, 5‐hexatrienen in fünfgliedrige Ringe mögliche pericyclische Reaktionen},
author = {Abhijit Mitra},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1002/ange.19800921205},
year = {2006},
date = {2006-01-20},
journal = {Angewandte Chemie},
volume = {92},
pages = {1005-1014},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2005
|
320. | Noise Characteristics of feed forward loops Journal Article Bhaswar Ghosh Bhaswar Ghosh, Karmakar R and Bose I Physical Biology, 2 , 36-45 (2005) Links | BibTeX | Tags: publication @article{22_96,
title = {Noise Characteristics of feed forward loops },
author = {Bhaswar Ghosh},
url = {https://pubmed.ncbi.nlm.nih.gov/16204855/},
year = {2005},
date = {2005-03-02},
journal = {Physical Biology},
volume = {2},
pages = {36-45},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
321. | SIGNIFICANCE OF mRNA AND siRNA SECONDARY STRUCTURES ON RNA INTERFERENCE EFFICIENCY Journal Article Abhijit Mitra D. Satyanarayana Rao,Abhijit Mitra National, 1-5 (2005) Links | BibTeX | Tags: publication @article{12d,
title = {SIGNIFICANCE OF mRNA AND siRNA SECONDARY STRUCTURES ON RNA INTERFERENCE EFFICIENCY},
author = {Abhijit Mitra},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/inproceedings/1971},
year = {2005},
date = {2005-01-17},
journal = {National},
pages = {1-5},
organization = {National},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
322. | Efficient Algorithms for Range Queries in Protein Sequence Analysis Journal Article Abhijit Mitra N Madhusudhanan,Prosenjit Gupta,Abhijit Mitra International, 2-7 (2005) Links | BibTeX | Tags: publication @article{11h,
title = {Efficient Algorithms for Range Queries in Protein Sequence Analysis},
author = {Abhijit Mitra},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/inproceedings/1972},
year = {2005},
date = {2005-01-04},
journal = {International},
pages = {2-7},
organization = {International},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2004
|
323. | Theoretical Studies of non-WatsonCrick Base Pairs in Double Helical Regions of Different RNA Structures Journal Article Abhijit Mitra BHABDYUTI SINHA, Dhananjay Bhattacharyya,Abhijit Mitra 10 (2004) Links | BibTeX | Tags: publication @article{11i,
title = {Theoretical Studies of non-WatsonCrick Base Pairs in Double Helical Regions of Different RNA Structures},
author = {Abhijit Mitra},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/660},
year = {2004},
date = {2004-11-10},
pages = {10},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
324. | IPSVAC – Integrated Platform for Sequence Visualization, Analysis and Comparison Journal Article Abhijit Mitra Naveena V K Yanamala,Harikrishna V Rekapalli,Sri Jyothsna Yeleswarapu,Ram Sateesh Talari,Abhijit Mitra 1-5 (2004) Links | BibTeX | Tags: publication @article{22_95,
title = {IPSVAC – Integrated Platform for Sequence Visualization, Analysis and Comparison},
author = {Abhijit Mitra},
url = {http://web2py.iiit.ac.in/research_centres/publications/view_publication/article/658},
year = {2004},
date = {2004-05-30},
pages = {1-5},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
325. | Motifs in gene transcription regulatory networks Journal Article Bhaswar Ghosh Bose I, Bhaswar Ghosh and Karmakar R Physica A, 346 , 49-57 (2004) BibTeX | Tags: publication @article{22_97,
title = {Motifs in gene transcription regulatory networks },
author = {Bhaswar Ghosh},
year = {2004},
date = {2004-01-14},
journal = {Physica A},
volume = {346},
pages = {49-57},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|
2003
|
326. | Controllability of spatiotemporal systems using constant pinnings Journal Article Nita Parekh Nita Parekh, Somdatta Sinha Physica A: Statistical Mechanics and its Applications, 318 , 200-212 (2003) Links | BibTeX | Tags: publication @article{11j,
title = {Controllability of spatiotemporal systems using constant pinnings},
author = {Nita Parekh},
url = {https://www.sciencedirect.com/science/article/abs/pii/S0378437102014280},
year = {2003},
date = {2003-02-01},
journal = {Physica A: Statistical Mechanics and its Applications},
volume = {318},
pages = {200-212},
keywords = {publication},
pubstate = {published},
tppubtype = {article}
}
|